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#!/bin/bash

# This is an installer script for QUAST
# install quast:
cd ~ # we will install quast in the home directory
sudo apt install git
git clone https://github.com/ablab/quast.git

# Move into the quast directory
cd quast

# download required libraries and setup quast
sudo apt-get update && sudo apt-get install -y \
pkg-config libfreetype6-dev libpng-dev python3-matplotlib
sudo apt install python3

sudo ln -s /usr/bin/python3 /usr/bin/python
sudo apt install python-setuptools

# And finally install quast
./install.sh