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https://github.com/ClaudiuGeorgiu/Obfuscapk

HOW IT WORKS
1. Generate your APK file in Android Studio, it cannot be bundle but APK
2. Use command line to obfuscate code
3. After Obfuscate use this https://shatter-box.com/knowledgebase/android-apk-signing-tool-apk-signer/
To sign your application with your keystore

Installation in Windows:
"I have check Obfusapk, you can use it on window too, but need a little requirements:
- Make sure to have a recent version of python3, apktool, jarsigner and zipalign installed and available
- Then use this command:
+ python -m obfuscapk.cli [params...]
instead of: obfuscapk [params...]
- Remember to add tool full path to windows environment variables: APKTOOL_PATH, JARSIGNER_PATH and ZIPALIGN_PATH
Beside if you have good Python Knowledge, you can write plugins for this Obfuscator to change XML, Image hash and name"


COMMAND I AM USING:
python3.7 -m obfuscapk.cli -i -p -o RandomManifest -o ArithmeticBranch -o AdvancedReflection -o Reflection -o DebugRemoval -o Goto -o Rebuild -o Reorder -o NewSignature -o NewAlignment lucasz.apk