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2025-01-13 21:11:48,168 [362192693]   FINE - #c.i.s.i.s.sshj - Called sftp.lstat(/home//xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py) in 7.47 ms (ok)
2025-01-13 21:11:48,168 [362192693]   FINE - #c.i.s.i.s.sshj - Fetched and cached permissions of /home//xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py: [size=79753;uid=1032,gid=1032;mode=[mask=100644];atime=1731573289,mtime=1735556382;]
2025-01-13 21:11:48,187 [362192712]   FINE - #c.i.s.i.s.sshj - Called SshjRemoteFileObject@13a48dd2(path /home//xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py, owned by Channel@255d4d92 id 1, remote id 0 for SshjSshConnection(xiaoyang2020@587e2091-a7f0-417e-bb8f-8cecf9974a71)@4de3451d).sftp.open() in 18.81 ms (ok)
2025-01-13 21:11:56,940 [362201465]   FINE - #c.i.s.i.s.sshj - com.intellij.ssh.impl.sshj.SshjRemoteFileObject$inputStream$1$1@3c66ee6f.inputStream() is being closed
2025-01-13 21:12:26,966 [362231491]   FINE - #c.i.s.i.s.sshj - Called SshjRemoteFileObject@13a48dd2(path /home//xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py, owned by Channel@255d4d92 id 1, remote id 0 for SshjSshConnection(xiaoyang2020@587e2091-a7f0-417e-bb8f-8cecf9974a71)@4de3451d).sftp.open([WRITE, CREAT, TRUNC]) in 30005.13 ms (exception)
2025-01-13 21:12:26,967 [362231492]   FINE - #c.i.s.i.s.sshj - Clearing permission cache of /home//xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py
2025-01-13 21:12:26,968 [362231493]   WARN - #c.i.s.i.s.sshj - File /home//xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py: Timeout expired
net.schmizz.sshj.sftp.SFTPException: Timeout expired
	at net.schmizz.sshj.sftp.SFTPException$1.chain(SFTPException.java:33)
	at net.schmizz.sshj.sftp.SFTPException$1.chain(SFTPException.java:26)
	at net.schmizz.concurrent.Promise.retrieve(Promise.java:139)
	at net.schmizz.sshj.sftp.SFTPEngine.doRequest(SFTPEngine.java:146)
	at net.schmizz.sshj.sftp.SFTPEngine.open(SFTPEngine.java:151)
	at net.schmizz.sshj.sftp.SFTPClient.open(SFTPClient.java:68)
	at net.schmizz.sshj.sftp.SFTPClient.open(SFTPClient.java:73)
	at com.intellij.ssh.impl.sshj.SshjRemoteFileObject.outputStream(SshjRemoteFileObject.kt:114)
	at com.intellij.ssh.impl.channels.FailSafeRemoteFileObject.outputStream(FailSafeRemoteFileObject.kt:115)
	at com.jetbrains.plugins.webDeployment.connections.platform.PlatformSftpFileObject.doGetOutputStream(PlatformSftpFileObject.java:143)
	at org.apache.commons.vfs2.provider.AbstractFileObject.getOutputStream(AbstractFileObject.java:1231)
	at org.apache.commons.vfs2.provider.DefaultFileContent.buildOutputStream(DefaultFileContent.java:386)
	at org.apache.commons.vfs2.provider.DefaultFileContent.getOutputStream(DefaultFileContent.java:258)
	at org.apache.commons.vfs2.provider.DefaultFileContent.getOutputStream(DefaultFileContent.java:246)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.lambda$uploadFile$1(RemoteEditUploadFilesTask.java:147)
	at com.jetbrains.plugins.webDeployment.connections.RemoteConnection.lambda$executeServerOperationSilently$1(RemoteConnection.java:55)
	at com.jetbrains.plugins.webDeployment.connections.RemoteConnectionPool$RemoteConnectionImpl.executeServerOperation(RemoteConnectionPool.java:140)
	at com.jetbrains.plugins.webDeployment.connections.RemoteConnection.executeServerOperationSilently(RemoteConnection.java:55)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.uploadFile(RemoteEditUploadFilesTask.java:140)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.doRun(RemoteEditUploadFilesTask.java:107)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.run(RemoteEditUploadFilesTask.java:73)
	at com.intellij.openapi.progress.impl.CoreProgressManager.startTask(CoreProgressManager.java:442)
	at com.intellij.openapi.progress.impl.ProgressManagerImpl.startTask(ProgressManagerImpl.java:114)
	at com.intellij.openapi.progress.impl.CoreProgressManager.lambda$runProcessWithProgressAsynchronously$5(CoreProgressManager.java:493)
	at com.intellij.openapi.progress.impl.ProgressRunner.lambda$submit$3(ProgressRunner.java:252)
	at com.intellij.openapi.progress.impl.CoreProgressManager.lambda$runProcess$2(CoreProgressManager.java:188)
	at com.intellij.openapi.progress.impl.CoreProgressManager.lambda$executeProcessUnderProgress$12(CoreProgressManager.java:608)
	at com.intellij.openapi.progress.impl.CoreProgressManager.registerIndicatorAndRun(CoreProgressManager.java:683)
	at com.intellij.openapi.progress.impl.CoreProgressManager.computeUnderProgress(CoreProgressManager.java:639)
	at com.intellij.openapi.progress.impl.CoreProgressManager.executeProcessUnderProgress(CoreProgressManager.java:607)
	at com.intellij.openapi.progress.impl.ProgressManagerImpl.executeProcessUnderProgress(ProgressManagerImpl.java:60)
	at com.intellij.openapi.progress.impl.CoreProgressManager.runProcess(CoreProgressManager.java:175)
	at com.intellij.openapi.progress.impl.ProgressRunner.lambda$submit$4(ProgressRunner.java:252)
	at java.base/java.util.concurrent.CompletableFuture$AsyncSupply.run(CompletableFuture.java:1768)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1$1.run(Executors.java:702)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1$1.run(Executors.java:699)
	at java.base/java.security.AccessController.doPrivileged(AccessController.java:399)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1.run(Executors.java:699)
	at java.base/java.lang.Thread.run(Thread.java:833)
Caused by: java.util.concurrent.TimeoutException: Timeout expired
	... 39 more
2025-01-13 21:12:26,970 [362231495]   WARN - #c.j.p.w.r.RemoteEditUploadFilesTask - Could not write to "sftp://det/xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py".
org.apache.commons.vfs2.FileSystemException: Could not write to "sftp://det/xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py".
	at org.apache.commons.vfs2.provider.AbstractFileObject.getOutputStream(AbstractFileObject.java:1235)
	at org.apache.commons.vfs2.provider.DefaultFileContent.buildOutputStream(DefaultFileContent.java:386)
	at org.apache.commons.vfs2.provider.DefaultFileContent.getOutputStream(DefaultFileContent.java:258)
	at org.apache.commons.vfs2.provider.DefaultFileContent.getOutputStream(DefaultFileContent.java:246)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.lambda$uploadFile$1(RemoteEditUploadFilesTask.java:147)
	at com.jetbrains.plugins.webDeployment.connections.RemoteConnection.lambda$executeServerOperationSilently$1(RemoteConnection.java:55)
	at com.jetbrains.plugins.webDeployment.connections.RemoteConnectionPool$RemoteConnectionImpl.executeServerOperation(RemoteConnectionPool.java:140)
	at com.jetbrains.plugins.webDeployment.connections.RemoteConnection.executeServerOperationSilently(RemoteConnection.java:55)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.uploadFile(RemoteEditUploadFilesTask.java:140)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.doRun(RemoteEditUploadFilesTask.java:107)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.run(RemoteEditUploadFilesTask.java:73)
	at com.intellij.openapi.progress.impl.CoreProgressManager.startTask(CoreProgressManager.java:442)
	at com.intellij.openapi.progress.impl.ProgressManagerImpl.startTask(ProgressManagerImpl.java:114)
	at com.intellij.openapi.progress.impl.CoreProgressManager.lambda$runProcessWithProgressAsynchronously$5(CoreProgressManager.java:493)
	at com.intellij.openapi.progress.impl.ProgressRunner.lambda$submit$3(ProgressRunner.java:252)
	at com.intellij.openapi.progress.impl.CoreProgressManager.lambda$runProcess$2(CoreProgressManager.java:188)
	at com.intellij.openapi.progress.impl.CoreProgressManager.lambda$executeProcessUnderProgress$12(CoreProgressManager.java:608)
	at com.intellij.openapi.progress.impl.CoreProgressManager.registerIndicatorAndRun(CoreProgressManager.java:683)
	at com.intellij.openapi.progress.impl.CoreProgressManager.computeUnderProgress(CoreProgressManager.java:639)
	at com.intellij.openapi.progress.impl.CoreProgressManager.executeProcessUnderProgress(CoreProgressManager.java:607)
	at com.intellij.openapi.progress.impl.ProgressManagerImpl.executeProcessUnderProgress(ProgressManagerImpl.java:60)
	at com.intellij.openapi.progress.impl.CoreProgressManager.runProcess(CoreProgressManager.java:175)
	at com.intellij.openapi.progress.impl.ProgressRunner.lambda$submit$4(ProgressRunner.java:252)
	at java.base/java.util.concurrent.CompletableFuture$AsyncSupply.run(CompletableFuture.java:1768)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1$1.run(Executors.java:702)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1$1.run(Executors.java:699)
	at java.base/java.security.AccessController.doPrivileged(AccessController.java:399)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1.run(Executors.java:699)
	at java.base/java.lang.Thread.run(Thread.java:833)
Caused by: org.apache.commons.vfs2.FileSystemException: Could not write to "sftp://det/xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py".
	at com.jetbrains.plugins.webDeployment.connections.platform.PlatformSftpFileObject.doGetOutputStream(PlatformSftpFileObject.java:147)
	at org.apache.commons.vfs2.provider.AbstractFileObject.getOutputStream(AbstractFileObject.java:1231)
	... 30 more
Caused by: com.intellij.ssh.SftpChannelException: File /home//xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py: Timeout expired
	at com.intellij.ssh.impl.sshj.SshjRemoteFileObject.outputStream(SshjRemoteFileObject.kt:549)
	at com.intellij.ssh.impl.channels.FailSafeRemoteFileObject.outputStream(FailSafeRemoteFileObject.kt:115)
	at com.jetbrains.plugins.webDeployment.connections.platform.PlatformSftpFileObject.doGetOutputStream(PlatformSftpFileObject.java:143)
	... 31 more
Caused by: net.schmizz.sshj.sftp.SFTPException: Timeout expired
	at net.schmizz.sshj.sftp.SFTPException$1.chain(SFTPException.java:33)
	at net.schmizz.sshj.sftp.SFTPException$1.chain(SFTPException.java:26)
	at net.schmizz.concurrent.Promise.retrieve(Promise.java:139)
	at net.schmizz.sshj.sftp.SFTPEngine.doRequest(SFTPEngine.java:146)
	at net.schmizz.sshj.sftp.SFTPEngine.open(SFTPEngine.java:151)
	at net.schmizz.sshj.sftp.SFTPClient.open(SFTPClient.java:68)
	at net.schmizz.sshj.sftp.SFTPClient.open(SFTPClient.java:73)
	at com.intellij.ssh.impl.sshj.SshjRemoteFileObject.outputStream(SshjRemoteFileObject.kt:114)
	... 33 more
Caused by: java.util.concurrent.TimeoutException: Timeout expired
	... 39 more
2025-01-13 21:12:26,973 [362231498]   FINE - #c.j.p.w.c.RemoteConnection - Added cloned connection to pool ofsftp://det:22/ in @192eb5d1; 3 connections exists
2025-01-13 21:12:26,973 [362231498]   FINE - #c.j.p.w.c.RemoteConnection - Releasing one of the connections to sftp://det:22/ in @192eb5d1; connections left 2
2025-01-13 21:12:26,974 [362231499]   FINE - #c.i.s.SshConnectionService - Creating sftp channel within SshjSshConnection(xiaoyang2020@587e2091-a7f0-417e-bb8f-8cecf9974a71)@4de3451d
2025-01-13 21:12:26,981 [362231506]   INFO - #c.i.s.i.s.sshj - Will request `sftp` subsystem
2025-01-13 21:12:38,524 [362243049]   FINE - #c.j.p.w.c.RemoteConnection - Added cloned connection to pool ofsftp://det:22/ in @192eb5d1; 3 connections exists
2025-01-13 21:12:56,982 [362261507]   INFO - #c.i.s.i.s.sshj - Error while closing < session channel: id=1, recipient=0, localWin=[winSize=2016269], remoteWin=[winSize=2095818] >
net.schmizz.sshj.connection.ConnectionException: Timeout expired
	at net.schmizz.sshj.connection.ConnectionException$1.chain(ConnectionException.java:32)
	at net.schmizz.sshj.connection.ConnectionException$1.chain(ConnectionException.java:26)
	at net.schmizz.concurrent.Promise.retrieve(Promise.java:139)
	at net.schmizz.concurrent.Event.await(Event.java:105)
	at net.schmizz.sshj.connection.channel.AbstractChannel.close(AbstractChannel.java:266)
	at com.intellij.ssh.impl.sshj.channels.SshjSshChannel$close$1.run(SshjSshChannel.kt:35)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1$1.run(Executors.java:702)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1$1.run(Executors.java:699)
	at java.base/java.security.AccessController.doPrivileged(AccessController.java:399)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1.run(Executors.java:699)
	at java.base/java.lang.Thread.run(Thread.java:833)
Caused by: java.util.concurrent.TimeoutException: Timeout expired
	... 11 more
2025-01-13 21:12:57,022 [362261547]   FINE - #c.i.s.i.s.sshj - Called sftp.lstat(/home//xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py) in 30005.75 ms (exception)
2025-01-13 21:12:57,023 [362261548]   WARN - #c.i.s.i.s.sshj - File /home//xiaoyang2020/chenxiaoyang_11/SOS_benchmark/ada_journal/SOS-Retrieval-Loop/src/retrieval_loop/get_init_weight.py: Timeout expired
net.schmizz.sshj.sftp.SFTPException: Timeout expired
	at net.schmizz.sshj.sftp.SFTPException$1.chain(SFTPException.java:33)
	at net.schmizz.sshj.sftp.SFTPException$1.chain(SFTPException.java:26)
	at net.schmizz.concurrent.Promise.retrieve(Promise.java:139)
	at net.schmizz.sshj.sftp.SFTPEngine.doRequest(SFTPEngine.java:146)
	at net.schmizz.sshj.sftp.SFTPEngine.stat(SFTPEngine.java:282)
	at net.schmizz.sshj.sftp.SFTPEngine.lstat(SFTPEngine.java:232)
	at net.schmizz.sshj.sftp.SFTPClient.lstat(SFTPClient.java:198)
	at com.intellij.ssh.impl.sshj.SshjLazyLstatHolder.g(SshjRemoteFileObject.kt:176)
	at com.intellij.ssh.impl.sshj.SshjLazyLstatHolder.isFileExist(SshjRemoteFileObject.kt:202)
	at com.intellij.ssh.impl.sshj.SshjRemoteFileObject.exists(SshjRemoteFileObject.kt:24)
	at com.intellij.ssh.impl.channels.FailSafeRemoteFileObject.exists(FailSafeRemoteFileObject.kt:71)
	at com.jetbrains.plugins.webDeployment.connections.platform.PlatformSftpFileSystem.getFileType(PlatformSftpFileSystem.java:105)
	at com.jetbrains.plugins.webDeployment.connections.platform.PlatformSftpFileObject.doGetType(PlatformSftpFileObject.java:99)
	at org.apache.commons.vfs2.provider.AbstractFileObject.getType(AbstractFileObject.java:1327)
	at org.apache.commons.vfs2.provider.AbstractFileObject.exists(AbstractFileObject.java:907)
	at com.jetbrains.plugins.webDeployment.DeploymentPathUtils.refreshRemoteFile(DeploymentPathUtils.java:89)
	at com.jetbrains.plugins.webDeployment.DeploymentPathUtils.refreshRemoteFile(DeploymentPathUtils.java:74)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.lambda$uploadFile$1(RemoteEditUploadFilesTask.java:143)
	at com.jetbrains.plugins.webDeployment.connections.RemoteConnection.lambda$executeServerOperationSilently$1(RemoteConnection.java:55)
	at com.jetbrains.plugins.webDeployment.connections.RemoteConnectionPool$RemoteConnectionImpl.executeServerOperation(RemoteConnectionPool.java:140)
	at com.jetbrains.plugins.webDeployment.connections.RemoteConnection.executeServerOperationSilently(RemoteConnection.java:55)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.uploadFile(RemoteEditUploadFilesTask.java:140)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.doRun(RemoteEditUploadFilesTask.java:107)
	at com.jetbrains.plugins.webDeployment.remoteEdit.RemoteEditUploadFilesTask.run(RemoteEditUploadFilesTask.java:73)
	at com.intellij.openapi.progress.impl.CoreProgressManager.startTask(CoreProgressManager.java:442)
	at com.intellij.openapi.progress.impl.ProgressManagerImpl.startTask(ProgressManagerImpl.java:114)
	at com.intellij.openapi.progress.impl.CoreProgressManager.lambda$runProcessWithProgressAsynchronously$5(CoreProgressManager.java:493)
	at com.intellij.openapi.progress.impl.ProgressRunner.lambda$submit$3(ProgressRunner.java:252)
	at com.intellij.openapi.progress.impl.CoreProgressManager.lambda$runProcess$2(CoreProgressManager.java:188)
	at com.intellij.openapi.progress.impl.CoreProgressManager.lambda$executeProcessUnderProgress$12(CoreProgressManager.java:608)
	at com.intellij.openapi.progress.impl.CoreProgressManager.registerIndicatorAndRun(CoreProgressManager.java:683)
	at com.intellij.openapi.progress.impl.CoreProgressManager.computeUnderProgress(CoreProgressManager.java:639)
	at com.intellij.openapi.progress.impl.CoreProgressManager.executeProcessUnderProgress(CoreProgressManager.java:607)
	at com.intellij.openapi.progress.impl.ProgressManagerImpl.executeProcessUnderProgress(ProgressManagerImpl.java:60)
	at com.intellij.openapi.progress.impl.CoreProgressManager.runProcess(CoreProgressManager.java:175)
	at com.intellij.openapi.progress.impl.ProgressRunner.lambda$submit$4(ProgressRunner.java:252)
	at java.base/java.util.concurrent.CompletableFuture$AsyncSupply.run(CompletableFuture.java:1768)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1$1.run(Executors.java:702)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1$1.run(Executors.java:699)
	at java.base/java.security.AccessController.doPrivileged(AccessController.java:399)
	at java.base/java.util.concurrent.Executors$PrivilegedThreadFactory$1.run(Executors.java:699)
	at java.base/java.lang.Thread.run(Thread.java:833)
Caused by: java.util.concurrent.TimeoutException: Timeout expired
	... 42 more
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